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ImmGen’s Spatial Omics Portal

Maps have powered human discovery for centuries. ImmGen is charting the mouse anatomy to bring a new perspective on tissue immunity through its latest program, ImmGenMaps. We hope this resource will help you understand the immune system and its wiring across anatomical compartments. Click the explore button to gain access to each dataset, and sign up for a free BioTuring account if needed.

Stay tuned as new datasets are added. Happy Exploring!

The ImmGen Team.

131 slides

Immgen

ID: Lu_Tr_F10
Species: mouse

Abstract

Lung tissue slice from healthy adult female mice

Immgen

ID: Lu_Tr_M11
Species: mouse

Abstract

Lung tissue slice from healthy adult male mice

Immgen

ID: Thy_F13
Species: mouse

Abstract

Thymus tissue slice from healthy adult female mice

Immgen

ID: Thy_M13
Species: mouse

Abstract

Thymus tissue slice from healthy adult male mice

Immgen

ID: BAT_F16
Species: mouse

Abstract

Brown Adipose Tissue slice from healthy adult female mice

Immgen

ID: Thy_F14
Species: mouse

Abstract

Thymus tissue slice from healthy adult female mice

Immgen

ID: Thy_M14
Species: mouse

Abstract

Thymus tissue slice from healthy adult male mice

Immgen

ID: CTX_HPF_CC_MY
Species: mouse

Abstract

Cortex, Hippocampus Formation and Corpus Calllosum tissues from healthy young male mice

Immgen

ID: CB_MY
Species: mouse

Abstract

Cerebellum tissue from healthy young male mice

Immgen

ID: CTX_HPF_CC_FO
Species: mouse

Abstract

Cortex, Hippocampus Formation and Corpus Calllosum tissues from healthy old female mice

Immgen

ID: CTX_HPF_CC_FY
Species: mouse

Abstract

Cortex, Hippocampus Formation and Corpus Calllosum tissues from healthy young female mice

Immgen

ID: CB_FO
Species: mouse

Abstract

Cerebellum tissue from healthy old female mice

Immgen

ID: CB_FY
Species: mouse

Abstract

Cerebellum tissue from healthy young female mice

Immgen

ID: CTX_HPF_CC_MO
Species: mouse

Abstract

Cortex, Hippocampus Formation and Corpus Calllosum tissues from healthy old male mice

Immgen

ID: CB_MO
Species: mouse

Abstract

Cerebellum tissue from healthy old male mice

Immgen

ID: SFO_MY_S27
Species: mouse

Abstract

Subfornical Organ tissue from healthy young male mice

Immgen

ID: SFO_MY_S8
Species: mouse

Abstract

Subfornical Organ tissue from healthy young male mice

Immgen

ID: SFO_MO_S6
Species: mouse

Abstract

Subfornical Organ tissue from healthy old male mice

Immgen

ID: SFO_MO_S28
Species: mouse

Abstract

Subfornical Organ tissue from healthy old male mice

Immgen

ID: SFO_MO_S25
Species: mouse

Abstract

Subfornical Organ tissue from healthy old male mice

Immgen

ID: SFO_FY_S24
Species: mouse

Abstract

Subfornical Organ tissue from healthy young female mice

Immgen

ID: SFO_FY_S5
Species: mouse

Abstract

Subfornical Organ tissue from healthy young female mice

Immgen

ID: SFO_FO_S7
Species: mouse

Abstract

Subfornical Organ tissue from healthy old female mice

Immgen

ID: SFO_FO_S26
Species: mouse

Abstract

Subfornical Organ tissue from healthy old female mice

Immgen

ID: OVLT_MY_S16
Species: mouse

Abstract

Organum Vasculosum of Lamina Terminalis tissue from healthy young male mice

Immgen

ID: OVLT_MY_S12
Species: mouse

Abstract

Organum Vasculosum of Lamina Terminalis tissue from healthy young male mice

Immgen

ID: OVLT_MO_S17
Species: mouse

Abstract

Organum Vasculosum of Lamina Terminalis tissue from healthy old male mice

Immgen

ID: OVLT_FY_S15
Species: mouse

Abstract

Organum Vasculosum of Lamina Terminalis tissue from healthy young female mice

Immgen

ID: OVLT_MY_S33
Species: mouse

Abstract

Organum Vasculosum of Lamina Terminalis tissue from healthy young male mice

Immgen

ID: OVLT_MO_S36
Species: mouse

Abstract

Organum Vasculosum of Lamina Terminalis tissue from healthy old male mice

Immgen

ID: OVLT_MO_S35
Species: mouse

Abstract

Organum Vasculosum of Lamina Terminalis tissue from healthy old male mice

Immgen

ID: OVLT_FY_S34
Species: mouse

Abstract

Organum Vasculosum of Lamina Terminalis tissue from healthy young female mice

Immgen

ID: OVLT_FO_S19
Species: mouse

Abstract

Organum Vasculosum of Lamina Terminalis tissue from healthy old female mice

Immgen

ID: ME_MY_S29
Species: mouse

Abstract

Median Eminence tissue from healthy young male mice

Immgen

ID: ME_FO_S37
Species: mouse

Abstract

Median Eminence tissue from healthy old female mice

Immgen

ID: OVLT_FO_S18
Species: mouse

Abstract

Organum Vasculosum of Lamina Terminalis tissue from healthy old female mice

Immgen

ID: ME_MO_S31
Species: mouse

Abstract

Median Eminence tissue from healthy old male mice

Immgen

ID: ME_FY_S30
Species: mouse

Abstract

Median Eminence tissue from healthy young female mice

Immgen

ID: ME_MO_S14
Species: mouse

Abstract

Median Eminence tissue from healthy old male mice

Immgen

ID: ME_MO_S10
Species: mouse

Abstract

Median Eminence tissue from healthy old male mice

Immgen

ID: ME_FY_S9
Species: mouse

Abstract

Median Eminence tissue from healthy young female mice

Immgen

ID: ME_FY_S13
Species: mouse

Abstract

Median Eminence tissue from healthy young female mice

Immgen

ID: ME_FO_S32
Species: mouse

Abstract

Median Eminence tissue from healthy old female mice

Immgen

ID: ME_FO_S11
Species: mouse

Abstract

Median Eminence tissue from healthy old female mice

Immgen

ID: AP_FO_S4
Species: mouse

Abstract

Area Postrema tissue from healthy old female mice

Immgen

ID: AP_MY_S1
Species: mouse

Abstract

Area Postrema tissue from healthy young male mice

Immgen

ID: AP_MO_S3
Species: mouse

Abstract

Area Postrema tissue from healthy old male mice

Immgen

ID: AP_FY_S2
Species: mouse

Abstract

Area Postrema tissue from healthy young female mice

Immgen

ID: AP_MO_S22
Species: mouse

Abstract

Area Postrema tissue from healthy old male mice

Immgen

ID: AP_FO_S23
Species: mouse

Abstract

Area Postrema tissue from healthy old female mice

Immgen

ID: AP_MY_S20
Species: mouse

Abstract

Area Postrema tissue from healthy young male mice

Immgen

ID: AP_FY_S21
Species: mouse

Abstract

Area Postrema tissue from healthy young female mice

Immgen

ID: Spl_M19
Species: mouse

Abstract

Spleen tissue slice from healthy adult male mice

Immgen

ID: Spl_M20
Species: mouse

Abstract

Spleen tissue slice from healthy adult male mice

Immgen

ID: Spl_F22
Species: mouse

Abstract

Spleen tissue slice from healthy adult female mice

Immgen

ID: Spl_F21
Species: mouse

Abstract

Spleen tissue slice from healthy adult female mice

Immgen

ID: Spl_F20
Species: mouse

Abstract

Spleen tissue slice from healthy adult female mice

Immgen

ID: FRT_F18
Species: mouse

Abstract

Female Reproductive Tract tissue slice from healthy adult female mice

Immgen

ID: BAT_M15
Species: mouse

Abstract

Brown Adipose Tissue slice from healthy adult male mice

Immgen

ID: BAT_M16
Species: mouse

Abstract

Brown Adipose Tissue slice from healthy adult male mice

Immgen

ID: Sk_F12
Species: mouse

Abstract

Skin tissue slice from healthy adult female mice

Immgen

ID: Sk_F11
Species: mouse

Abstract

Skin tissue slice from healthy adult female mice

Immgen

ID: Ht_M7
Species: mouse

Abstract

Heart tissue slice from healthy adult male mice

Immgen

ID: Ht_M8
Species: mouse

Abstract

Heart tissue slice from healthy adult male mice

Immgen

ID: FRT_F19
Species: mouse

Abstract

Female Reproductive Tract tissue slice from healthy adult female mice

Immgen

ID: EWAT_M17
Species: mouse

Abstract

Epididimal White Adipose Tissue tissue slice from healthy adult male mice

Immgen

ID: SWAT_M17
Species: mouse

Abstract

SubCutaneous White Adipose Tissue tissue slice from healthy adult male mice

Immgen

ID: EWAT_M16
Species: mouse

Abstract

Epididimal White Adipose Tissue tissue slice from healthy adult male mice

Immgen

ID: SWAT_M16
Species: mouse

Abstract

SubCutaneous White Adipose Tissue tissue slice from healthy adult male mice

Immgen

ID: EWAT_F15
Species: mouse

Abstract

Epididimal White Adipose Tissue tissue slice from healthy adult female mice

Immgen

ID: EWAT_F16
Species: mouse

Abstract

Epididimal White Adipose Tissue tissue slice from healthy adult female mice

Immgen

ID: SWAT_F16
Species: mouse

Abstract

SubCutaneous White Adipose Tissue tissue slice from healthy adult female mice

Immgen

ID: SWAT_F15
Species: mouse

Abstract

SubCutaneous White Adipose Tissue tissue slice from healthy adult female mice

Immgen

ID: BM_M16
Species: mouse

Abstract

Bone Marrow tissue slice from healthy adult male mice

Immgen

ID: Ln_mes_M17
Species: mouse

Abstract

mesenteric Lymph Node tissue slice from healthy adult male mice

Immgen

ID: Ln_ing_M17
Species: mouse

Abstract

inguinal Lymph Node tissue slice from healthy adult male mice

Immgen

ID: Ln_mes_F15
Species: mouse

Abstract

mesenteric Lymph Node tissue slice from healthy adult female mice

Immgen

ID: Ln_ing_F15
Species: mouse

Abstract

inguinal Lymph Node tissue slice from healthy adult female mice

Immgen

ID: Ln_cerv_M17
Species: mouse

Abstract

cervical Lymph Node tissue slice from healthy adult male mice

Immgen

ID: Ln_ax_M17
Species: mouse

Abstract

axillary Lymph Node tissue slice from healthy adult male mice

Immgen

ID: Ln_cerv_F15
Species: mouse

Abstract

cervical Lymph Node tissue slice from healthy adult female mice

Immgen

ID: Lu_Tr_M10
Species: mouse

Abstract

Lung tissue slice from healthy adult male mice

Immgen

ID: Lu_Tr_F11
Species: mouse

Abstract

Lung tissue slice from healthy adult female mice

Immgen

ID: BM_F16
Species: mouse

Abstract

Bone Marrow tissue slice from healthy adult female mice

Immgen

ID: BAT_F15
Species: mouse

Abstract

Brown Adipose Tissue slice from healthy adult female mice

Immgen

ID: Ln_ax_F15
Species: mouse

Abstract

axillary Lymph Node tissue slice from healthy adult female mice

Immgen

ID: Sk_M11
Species: mouse

Abstract

Skin tissue slice from healthy adult male mice

Immgen

ID: Sk_M10
Species: mouse

Abstract

Skin tissue slice from healthy adult male mice

Immgen

ID: Sk_F12
Species: mouse

Abstract

Skin tissue slice from healthy adult female mice

Immgen

ID: Sk_F11
Species: mouse

Abstract

Skin tissue slice from healthy adult female mice

Immgen

ID: Pla_FMI_rep2
Species: mouse

Abstract

Maternal Fetal Interface, Gastration Day 16.5 tissue from healthy mice

Immgen

ID: Pla_FMI_rep1
Species: mouse

Abstract

Maternal Fetal Interface, Gastration Day 16.5 tissue from healthy mice

Immgen

ID: SI_F3
Species: mouse

Abstract

Small Intestine tissue slice from healthy adult female mice

Immgen

ID: SI_M3
Species: mouse

Abstract

Small Intestine tissue slice from healthy adult male mice

Immgen

ID: Kid_M10
Species: mouse

Abstract

Kidney tissue slice from healthy adult male mice

Immgen

ID: Kid_F12
Species: mouse

Abstract

Kidney tissue slice from healthy adult female mice

Immgen

ID: Kid_M11
Species: mouse

Abstract

Kidney tissue slice from healthy adult male mice

Immgen

ID: Kid_F11
Species: mouse

Abstract

Kidney tissue slice from healthy adult female mice

Immgen

ID: Lv_M8
Species: mouse

Abstract

Liver tissue slice from healthy adult male mice

Immgen

ID: UGI_M8
Species: mouse

Abstract

Upper GastroIntestinal Tract tissue slice from healthy adult male mice

Immgen

ID: UGI_F8
Species: mouse

Abstract

Upper GastroIntestinal Tract tissue slice from healthy adult female mice

Immgen

ID: MG4_baseline
Species: mouse

Abstract

Mammary Gland tissue slice from healthy adult female mice

Immgen

ID: Bla_M9
Species: mouse

Abstract

Bladder tissue slice from healthy adult male mice

Immgen

ID: Emb_GD8-5_rep2
Species: mouse

Abstract

Maternal Fetal Interface, Gastration Day 8.5 tissue from healthy mice

Immgen

ID: Emb_GD8-5_rep1
Species: mouse

Abstract

Maternal Fetal Interface, Gastration Day 8.5 tissue from healthy mice

Immgen

ID: Bla_M7
Species: mouse

Abstract

Bladder tissue slice from healthy adult male mice

Immgen

ID: Bla_M8
Species: mouse

Abstract

Bladder tissue slice from healthy adult male mice

Immgen

ID: Emb_GD8-5_rep3
Species: mouse

Abstract

Maternal Fetal Interface, Gastration Day 8.5 tissue from healthy mice

Immgen

ID: MG5_baseline
Species: mouse

Abstract

Mammary Gland tissue slice from healthy adult female mice

Immgen

ID: MG1_baseline
Species: mouse

Abstract

Mammary Gland tissue slice from healthy adult female mice

Immgen

ID: MG3_baseline
Species: mouse

Abstract

Mammary Gland tissue slice from healthy adult female mice

Immgen

ID: Lv_F7
Species: mouse

Abstract

Liver tissue slice from healthy adult female mice

Immgen

ID: Ht_M8
Species: mouse

Abstract

Heart tissue slice from healthy adult male mice

Immgen

ID: Ht_M7
Species: mouse

Abstract

Heart tissue slice from healthy adult male mice

Immgen

ID: Ht_F8
Species: mouse

Abstract

Heart tissue slice from healthy adult female mice

Immgen

ID: SG_M8
Species: mouse

Abstract

Salivary Gland tissue slice from healthy adult male mice

Immgen

ID: Ht_F7
Species: mouse

Abstract

Heart tissue slice from healthy adult female mice

Immgen

ID: SG_M7
Species: mouse

Abstract

Salivary Gland tissue slice from healthy adult male mice

Immgen

ID: SG_F9
Species: mouse

Abstract

Salivary Gland tissue slice from healthy adult female mice

Immgen

ID: SG_F8
Species: mouse

Abstract

Salivary Gland tissue slice from healthy adult female mice

Immgen

ID: Bla_F9
Species: mouse

Abstract

Bladder tissue slice from healthy adult female mice

Immgen

ID: SG_F7
Species: mouse

Abstract

Salivary Gland tissue slice from healthy adult female mice

Immgen

ID: Bla_F8
Species: mouse

Abstract

Bladder tissue slice from healthy adult female mice

Immgen

ID: Bla_F7
Species: mouse

Abstract

Bladder tissue slice from healthy adult female mice

Immgen

ID: Pr_M9
Species: mouse

Abstract

Prostate tissue slice from healthy adult male mice

Immgen

ID: Pr_M8
Species: mouse

Abstract

Prostate tissue slice from healthy adult male mice

Immgen

ID: Pr_M7
Species: mouse

Abstract

Prostate tissue slice from healthy adult male mice

Immgen

ID: Co_M2
Species: mouse

Abstract

Colon tissue slice from healthy adult male mice

Immgen

ID: Co_F3
Species: mouse

Abstract

Colon tissue slice from healthy adult female mice

Immgen

ID: Co_M3
Species: mouse

Abstract

Colon tissue slice from healthy adult male mice

Immgen

ID: Co_F2
Species: mouse

Abstract

Colon tissue slice from healthy adult female mice