BioTuring studies

Search available studies in BioTuring single-cell database using standardized metadata

cancer-related
normal
autoimmune diseases
lung cancer
kidney cancer
overian/fallopian cancer
colorectal cancer
pancreatic cancer
bladder cancer
liver cancer
blood and bone marrow cancer
lung tissue
digestive system
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type of tissue or organ from which a sample is collected
adipose
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in vitro cell line
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xenogratf
condition
medical condition of a donor
azoospermia
breast cancer
chronic inflammation
dementia due to Lewy body disease
diabetes
disease of the blood or blood-forming organs
disease of the circulatory system
disease of the digestive system
disease of the genitourinary system
disease of the immune system
disease of the musculoskeletal system or connective tissue
disease of the skin
disease of the visual system
fibrosis disease
infectious or parasitic disease
multiple diseases
neoplasm of brain or central nervous system
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neoplasm of supportive and connective tissues
nervous system disease
normal
nutritional or metabolic disease
obstructive sleep apnea
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unexplained repeated pregnancy loss
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where a sample is collected from a subject
adjacent normal tissue
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authors' annotation about different cell types in a sample
B cell
blood cell
connective tissue cell
embryonic cell
endothelial cell
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germ line cell
glial cell
innate lymphoid cell
kidney epithelial cell
muscle cell
myeloid leukocyte
neural cell
progenitor cell
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cancer cell
malignant cells identified from a cancerous sample
central nervous system origin
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hematopoietic tissue origin
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plasma cell origin
undefined origin
treatment
type of therapy applied to a subject
androgen deprivation therapy
anti-inflammatory agent
anti-PD-1 and anti-CTLA-4 monoclonal antibody
antibiotics
antimetabolite
antiviral agent
CAR-T
chemotherapy
combined therapy
diabetes medication
disease-modifying antirheumatic drug
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no treatment
proteasome inhibitor
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response to treatment
how a subject response after a course of treatment
clonal expansion
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gender
biological gender of a donor
female
male
transfemale
developmental stage
age period of a donor
adolescent
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first trimester fetal
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second trimester fetal
third trimester fetal
sequencing platform
platform used for single-cell RNA-sequencing
10x
10X, single nuclei
automated microwell array-based platform
BD Rhapsody
C1 Fluidigm
CapID
CEL-Seq
CEL-Seq2
CITE-seq
ddSEQ
DroNc-seq
DropSeq
DropSeq, single nuclei
ECCITE-seq
GEXSCOPE scRNA
gmcSCRB-seq
ICELL8
inDrop
INs-seq
MARS-Seq
MARS-seq2.0
mCEL-Seq2
Microwell scRNA-seq
MIRACL-Seq
MutaSeq
Quartz-seq
scChaRM-seq
sci-Plex
sci-RNA-seq3
scTrio-seq2
Seq-Well
smart-seq
smart-seq2
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TARGET-seq
TruSeq
quantification
a program or package used for quantification of read counts
BEDTools
bioconductor package
celescope
CellRanger
Cufflinks
dropEst
Dropseq-tools
featureCount
GSNAP
HTSeq
HTSeqGenie
Immcantation framework
kallisto
MetaCell
Rhapsody analysis pipeline
rpkmforgenes
RSEM
RUM
Salmon
scopetools
SEQC
SPLiT-seq pipeline
STAR
UMI tools
USeq package
zUMIs
sampling technique
how a sample is collected
aspirate
biopsy
bronchial lavage
bronchoalveolar lavage
bronchoscopic microsampling
brushing
core needle biopsy
endoscopic biopsy
forceps biopsy
leukapheresis
lumbar puncture
nasopharyngeal swab
needle biopsy
paracentesis
punch biopsy
sputum induction
suction blister
surgical resection
thoracentesis
venipuncture
storage technique
how a sample is preserved before being processed
FFPE
fresh
fresh frozen
incubation
post-mortem analysis, fresh
post-mortem analysis, fresh frozen

1,013 studies 54,974,347 cells

CD27hiCD38hi plasmablasts are activated B cells of mixed origin with distinct function (Smart-seq2))

View
ID: 
GSE172180_SmartSeq
Total cells: 
890
Number of matched cells: 
890
Abtract
Clinically important broadly reactive B cells evolve during multiple infections, with B cells re-activated after secondary infection differing from B cells activated after a primary infection. Here we studied CD27highCD38high plasmablasts from patients with a primary or secondary dengue virus infection. Three transcriptionally and functionally distinct clusters were identified. The largest cluster 0/1 was plasma cell-related, with cells coding for serotype cross-reactive antibodies of the IgG1 isotype, consistent with memory B cell activation during an extrafollicular response. Cells in clusters 2 and 3 expressed low levels of antibody genes and high levels of genes associated with oxidative phosphorylation, EIF2 pathway, and mitochondrial dysfunction. Clusters 2 and 3 showed a transcriptional footprint of T cell help, in line with activation from naive B cells or memory B cells. Our results contribute to the understanding of the parallel B cell activation events that occur in humans after natural primary and secondary infection.
Metadata overview
Dimensionality reduction

Oleic acid restores suppressive defects in tissue-resident FOXP3 Tregs from patients with multiple sclerosis

View
ID: 
GSE152197
Total cells: 
2,931
Number of matched cells: 
2931
Abtract
FOXP3+ Tregs rely on fatty acid β-oxidation-driven (FAO-driven) oxidative phosphorylation (OXPHOS) for differentiation and function. Recent data demonstrate a role for Tregs in the maintenance of tissue homeostasis, with tissue-resident Tregs possessing tissue-specific transcriptomes. However, specific signals that establish tissue-resident Treg programs remain largely unknown. Tregs metabolically rely on FAO, and considering the lipid-rich environments of tissues, we hypothesized that environmental lipids drive Treg homeostasis. First, using human adipose tissue to model tissue residency, we identified oleic acid as the most prevalent free fatty acid. Mechanistically, oleic acid amplified Treg FAO-driven OXPHOS metabolism, creating a positive feedback mechanism that increased the expression of FOXP3 and phosphorylation of STAT5, which enhanced Treg-suppressive function. Comparing the transcriptomic program induced by oleic acid with proinflammatory arachidonic acid, we found that Tregs sorted from peripheral blood and adipose tissue of healthy donors transcriptomically resembled the Tregs treated in vitro with oleic acid, whereas Tregs from patients with multiple sclerosis (MS) more closely resembled an arachidonic acid transcriptomic profile. Finally, we found that oleic acid concentrations were reduced in patients with MS and that exposure of MS Tregs to oleic acid restored defects in their suppressive function. These data demonstrate the importance of fatty acids in regulating tissue inflammatory signals.
Metadata overview
Dimensionality reduction

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adipose
adrenal gland
ascites
biliary system
bladder
blood
blood vessel
bone marrow
brain
breast
chest wall
embryonic tissue
esophagus
eye
heart
in vitro cell line
in vitro organoid
intestine
kidney
lymph node
mass
milk
muscle
oral cavity
peritoneum
reproductive system
respiratory system
skeletal system
skin
spinal cord
spleen
stomach
thymus
xenogratf
Select all
8,172,141 cells - 153 studies
alveolar milieu
0 cell - 0 study
bronchiole
28090 cells - 2 studies
bronchoalveolar lavage fluid
484544 cells - 6 studies
bronchus
332234 cells - 15 studies
endobronchial lining fluid
17451 cells - 1 study
ethmoid sinus
26839 cells - 2 studies
inferior turbinates
18421 cells - 9 studies
lower lobe
236343 cells - 12 studies
lung
5160629 cells - 89 studies
lung airway
222191 cells - 9 studies
middle lobe
10460 cells - 2 studies
nasal cavity
378931 cells - 5 studies
nasopharynx
232401 cells - 7 studies
nasopharynx mucosa
104202 cells - 5 studies
olfactory region
23128 cells - 1 study
pleura
50465 cells - 5 studies
pleural fluid
6291 cells - 3 studies
respiratory system
308794 cells - 2 studies
sputum
35760 cells - 4 studies
superior turbinate
6488 cells - 1 study
trachea
136148 cells - 9 studies
upper lobe
352331 cells - 14 studies
Select all
189,368 cells - 12 studies
bladder
189368 cells - 12 studies
Select all
1,710,048 cells - 59 studies
abdominal skin
7953 cells - 2 studies
ankle or foot skin
96010 cells - 2 studies
arm skin
172691 cells - 6 studies
axilla skin
5735 cells - 1 study
axillary skin
0 cell - 0 study
back skin
143 cells - 1 study
buttock skin
0 cell - 0 study
cheek skin
5497 cells - 1 study
dermis
247888 cells - 6 studies
ear skin
6509 cells - 1 study
epidermis
223746 cells - 5 studies
forehead skin
9054 cells - 1 study
foreskin
43919 cells - 4 studies
groin skin
0 cell - 0 study
knee skin
1519 cells - 1 study
leg skin
24648 cells - 6 studies
metallothionein-null skin
0 cell - 0 study
neck skin
12690 cells - 2 studies
nose skin
348 cells - 1 study
palm skin
1380 cells - 1 study
scalp skin
32670 cells - 2 studies
shoulder skin
0 cell - 0 study
skin
771494 cells - 42 studies
truncal skin
46154 cells - 1 study
Select all
259,280 cells - 21 studies
spleen
259280 cells - 21 studies
Select all
675,211 cells - 39 studies
axillary lymph node
42114 cells - 5 studies
cervical lymph node
0 cell - 0 study
external iliac lymph node
181 cells - 1 study
femoral lymph node
3499 cells - 2 studies
iliac lymph node
856 cells - 2 studies
inguinal lymph node
0 cell - 0 study
lymph node
614590 cells - 37 studies
mesenteric lymph node
13971 cells - 1 study
parotid lymph node
0 cell - 0 study
Select all
6,026,177 cells - 89 studies
brain
355623 cells - 27 studies
cerebellum
1240111 cells - 9 studies
cerebral cortex
461204 cells - 7 studies
cerebrospinal fluid
81163 cells - 5 studies
cerebrum
1807815 cells - 5 studies
choroid plexus
15748 cells - 3 studies
entorhinal cortex
42528 cells - 1 study
forebrain
28791 cells - 2 studies
frontal lobe
218382 cells - 19 studies
ganglionic eminence
1682 cells - 2 studies
hippocampus
177839 cells - 4 studies
hypothalamus
135731 cells - 1 study
insula
2951 cells - 1 study
medulla oblongata
18416 cells - 1 study
midbrain
82861 cells - 4 studies
occipital lobe
173101 cells - 11 studies
parietal lobe
423058 cells - 18 studies
pituitary gland
77561 cells - 2 studies
pons
2889 cells - 1 study
prefrontal cortex
304238 cells - 12 studies
substantia nigra
40453 cells - 1 study
superior frontal gyrus
63608 cells - 1 study
telencephalon
0 cell - 0 study
temporal lobe
269992 cells - 22 studies
thalamus
432 cells - 1 study
Select all
2,989,961 cells - 79 studies
A549 cell line
143015 cells - 1 study
BCi-NS1.1 cell line
0 cell - 0 study
Calu-3 cell line
48890 cells - 1 study
H1299 cell line
24754 cells - 1 study
HEK 293 cell line
12189 cells - 2 studies
HeLa S3 cell line
3899 cells - 1 study
hematopoietic stem and progenitor cell (HSPCs)
38 cells - 1 study
human embryonic stem cell
194945 cells - 21 studies
human induced pluripotent stem cell
1926822 cells - 33 studies
human umbilical vein endothelial cells (HUVEC)
64701 cells - 2 studies
IGR37 cell line
4024 cells - 1 study
in vitro cell line
0 cell - 0 study
Jurkat cell
56 cells - 1 study
K562 cell line
171668 cells - 4 studies
lymphoblastoid cell line
24020 cells - 2 studies
MCF7 cell line
292394 cells - 2 studies
MUTZ-3 cell line
1502 cells - 1 study
non-small cell lung cancer cell line
23056 cells - 4 studies
OCI-AML3 cell line
1178 cells - 1 study
RCC243 cell line
7975 cells - 1 study
Rh41 cell line
0 cell - 0 study
RPMI 8226 cell line
4434 cells - 1 study
SET-2 cell line
86 cells - 1 study
synovial sarcoma cell line
12263 cells - 1 study
THP-1 cell line
20712 cells - 1 study
UACC257 cell line
7340 cells - 1 study
Select all
2,590,195 cells - 82 studies
glomerulus
766 cells - 1 study
kidney
1985188 cells - 72 studies
kidney graft
14561 cells - 2 studies
nephron
21398 cells - 1 study
renal cortex
272698 cells - 9 studies
renal medulla
124187 cells - 7 studies
renal pelvis
20492 cells - 2 studies
ureter
97752 cells - 4 studies
urine
53153 cells - 2 studies
Select all
627,146 cells - 28 studies
buccal mucosa
44869 cells - 2 studies
dental pulp
99879 cells - 5 studies
floor of the mouth
12736 cells - 1 study
gingiva
107584 cells - 3 studies
larynx
12566 cells - 2 studies
oral cavity
69189 cells - 6 studies
oropharynx
43412 cells - 1 study
periodontium
2882 cells - 1 study
salivary gland
52002 cells - 3 studies
tongue
60597 cells - 2 studies
tonsil
121430 cells - 13 studies
Select all
641,061 cells - 16 studies
adrenal gland
641061 cells - 16 studies
Select all
2,448,863 cells - 61 studies
appendix
10864 cells - 2 studies
ascending colon
162854 cells - 10 studies
caecum
131502 cells - 13 studies
colon
546750 cells - 25 studies
colonic lamina propria
41135 cells - 2 studies
descending colon
52159 cells - 4 studies
duodenum
51602 cells - 5 studies
hepatic flexure
20467 cells - 5 studies
ileal mucosa
11855 cells - 1 study
ileum
369842 cells - 7 studies
intestine
391044 cells - 13 studies
jejunum
15160 cells - 4 studies
lamina propria
1886 cells - 1 study
large intestine
13680 cells - 1 study
rectosigmoid colon
34433 cells - 4 studies
rectum
216755 cells - 19 studies
sigmoid colon
264243 cells - 16 studies
small bowel
131 cells - 1 study
small intestine
16779 cells - 2 studies
transverse colon
95722 cells - 12 studies
Select all
474,818 cells - 14 studies
thymus
474818 cells - 14 studies
Select all
459,403 cells - 21 studies
annulus fibrosus
27000 cells - 1 study
articular cartilage
0 cell - 0 study
bone
121169 cells - 5 studies
calvaria
5129 cells - 1 study
cartilage endplate
27940 cells - 1 study
fascia
22995 cells - 1 study
mandible
18419 cells - 2 studies
nucleus pulposus
36352 cells - 1 study
rib
5992 cells - 1 study
skeletal system
0 cell - 0 study
synovial fluid
24781 cells - 2 studies
synovial joint
69543 cells - 3 studies
synovial membrane
251 cells - 1 study
synovium
30318 cells - 4 studies
tendon
69514 cells - 2 studies
Select all
895,578 cells - 26 studies
breast
855512 cells - 24 studies
breast duct
14706 cells - 1 study
breast lobule
13985 cells - 1 study
mammary gland
11375 cells - 1 study
Select all
1,123,702 cells - 42 studies
bone marrow
1123702 cells - 42 studies
Select all
41,726 cells - 9 studies
ascites
41726 cells - 9 studies
Select all
12,975,669 cells - 196 studies
blood
290526 cells - 16 studies
cultured blood
82154 cells - 5 studies
peripheral blood
12265537 cells - 172 studies
umbilical cord blood
337452 cells - 8 studies
Select all
350,733 cells - 9 studies
esophagus
350733 cells - 9 studies
Select all
193,687 cells - 17 studies
stomach
193687 cells - 17 studies
Select all
862,736 cells - 34 studies
cornea
110212 cells - 8 studies
corneal limbus
11205 cells - 1 study
corneoscleral tissue
17587 cells - 1 study
eye
385149 cells - 14 studies
fovea retina
96273 cells - 3 studies
macula lutea
21553 cells - 4 studies
neural retina
1636 cells - 1 study
peripheral retina
71772 cells - 7 studies
retina
135433 cells - 4 studies
retinal pigment epithelium
11916 cells - 3 studies
trabecular meshwork
0 cell - 0 study
Select all
1,207,869 cells - 55 studies
cervix
19906 cells - 2 studies
chorionic villi
9898 cells - 1 study
decidua
36186 cells - 1 study
endometrium
169400 cells - 6 studies
epididymis
5299 cells - 1 study
gonad
20152 cells - 1 study
ovary
277517 cells - 13 studies
oviduct
84092 cells - 2 studies
placenta
77535 cells - 7 studies
prostate
308103 cells - 14 studies
reproductive system
0 cell - 0 study
testis
120937 cells - 12 studies
uterus
78844 cells - 7 studies
vagina
0 cell - 0 study
Select all
171,432 cells - 12 studies
muscle
171432 cells - 12 studies
Select all
1,160,021 cells - 20 studies
aorta
0 cell - 0 study
heart
374907 cells - 12 studies
heart left ventricle
327322 cells - 7 studies
heart right ventricle
159299 cells - 3 studies
left cardiac atrium
155641 cells - 4 studies
right cardiac atrium
142852 cells - 4 studies
Select all
5,916 cells - 1 study
spinal cord
5916 cells - 1 study
Select all
79,749 cells - 9 studies
human brain xenogratf
29444 cells - 3 studies
islet xenograft
2350 cells - 1 study
mouse spleen xenogratf
94 cells - 1 study
tumor xenograft
47861 cells - 4 studies
xenogratf
0 cell - 0 study
Select all
257,192 cells - 11 studies
adipose
34369 cells - 4 studies
omental fat pad
8740 cells - 1 study
omentum
50049 cells - 5 studies
subcutaneous adipose tissue
71050 cells - 2 studies
visceral adipose tissue
92984 cells - 2 studies
Select all
150,328 cells - 9 studies
artery
9652 cells - 1 study
ascending thoracic aortia
68127 cells - 2 studies
blood vessel
17071 cells - 1 study
carotid artery
6094 cells - 3 studies
carotid endothelium
4048 cells - 1 study
descending thoracic aorta
34093 cells - 1 study
mesenteric artery
11243 cells - 1 study
Select all
2,231,470 cells - 72 studies
bone marrow organoid
8270 cells - 1 study
brain organoid
0 cell - 0 study
cerebral organoid
985806 cells - 27 studies
colonic organoid
9137 cells - 1 study
endometrial organoid
142828 cells - 2 studies
epididymis epithelial organoid
2114 cells - 1 study
ileal organoid
25116 cells - 1 study
in vitro organoid
15990 cells - 1 study
intestine organoid
35949 cells - 6 studies
kidney organoid
817510 cells - 21 studies
liver organoid
4059 cells - 1 study
lung organoid
91790 cells - 4 studies
neural tube organoid
0 cell - 0 study
prostate organoid
7422 cells - 1 study
retinal organoid
85479 cells - 5 studies
Select all
4,637 cells - 1 study
abdominal mass
4637 cells - 1 study
caecum mass
0 cell - 0 study
iliac fossa mass
0 cell - 0 study
mass
0 cell - 0 study
neck mass
0 cell - 0 study
pelvis mass
0 cell - 0 study
supraclavicular mass
0 cell - 0 study
Select all
1,729,106 cells - 63 studies
biliary system
0 cell - 0 study
common bile duct
4703 cells - 2 studies
gallbladder
9769 cells - 1 study
hepatic central vein
0 cell - 0 study
hepatic portal vein
0 cell - 0 study
islet of Langerhans
134645 cells - 10 studies
liver
1157893 cells - 44 studies
pancreas
264268 cells - 19 studies
pancreas body
60958 cells - 2 studies
pancreas head
45456 cells - 2 studies
pancreas tail
45187 cells - 2 studies
transverse fissure of the liver
0 cell - 0 study
uncinate process of pancreas
6227 cells - 1 study
Select all
49,833 cells - 3 studies
mesentery
2501 cells - 1 study
peritoneum
47332 cells - 3 studies
Select all
23,154 cells - 1 study
chest wall
23154 cells - 1 study
Select all
11,865 cells - 3 studies
embryonic tissue
1529 cells - 1 study
head
271 cells - 1 study
yolk sac
10065 cells - 2 studies
Select all
49,310 cells - 1 study
milk
49310 cells - 1 study
azoospermia
breast cancer
chronic inflammation
dementia due to Lewy body disease
diabetes
disease of the blood or blood-forming organs
disease of the circulatory system
disease of the digestive system
disease of the genitourinary system
disease of the immune system
disease of the musculoskeletal system or connective tissue
disease of the skin
disease of the visual system
fibrosis disease
infectious or parasitic disease
multiple diseases
neoplasm of brain or central nervous system
neoplasm of epithelial tissue
neoplasm of hematopoietic tissue
neoplasm of lymphoid tissues
neoplasm of plasma cell
neoplasm of supportive and connective tissues
nervous system disease
normal
nutritional or metabolic disease
obstructive sleep apnea
other neoplasms
presbyosmia
transplant rejection
unexplained repeated pregnancy loss
Select all
24,246,689 cells - 587 studies
normal
24246689 cells - 587 studies
Select all
1,746,507 cells - 70 studies
bladder cancer
87765 cells - 5 studies
cervical cancer
12554 cells - 1 study
colon cancer
15420 cells - 3 studies
colonic polyposis
9190 cells - 2 studies
colorectal cancer
325536 cells - 12 studies
endobronchial carcinoid
85522 cells - 3 studies
hepatoblastoma
67110 cells - 1 study
intestinal metaplasia
13714 cells - 2 studies
kidney cancer
162138 cells - 7 studies
lung cancer
13998 cells - 3 studies
lymphangioleiomyomatosis
32804 cells - 2 studies
mixed müllerian tumor
9712 cells - 1 study
non-small cell lung cancer
311893 cells - 14 studies
other neoplasms
172290 cells - 5 studies
ovarian cancer
252144 cells - 11 studies
pancreatic cancer
14066 cells - 4 studies
prostate cancer
122290 cells - 4 studies
retinoblastoma
12965 cells - 1 study
testicular cancer
7413 cells - 2 studies
uterine cancer
0 cell - 0 study
Wilms' tumor
17983 cells - 3 studies
Select all
1,663,636 cells - 29 studies
breast cancer
181473 cells - 12 studies
breast metaplastic carcinoma
35738 cells - 2 studies
ER-positive breast cancer
257058 cells - 6 studies
HER2-positive breast cancer
70060 cells - 7 studies
invasive breast apocrine carcinoma
4472 cells - 1 study
invasive breast ductal carcinoma
45616 cells - 2 studies
lobular breast cancer
0 cell - 0 study
luminal A breast cancer
305256 cells - 3 studies
luminal B breast cancer
86 cells - 1 study
PR-positive breast cancer
2901 cells - 1 study
preneoplastic BRCA1+/–
23425 cells - 1 study
triple-negative breast cancer
737551 cells - 14 studies
Select all
2,152,317 cells - 48 studies
allergy
0 cell - 0 study
atopic dermatitis
217852 cells - 9 studies
autoimmune encephalitis
288 cells - 1 study
coeliac disease
31907 cells - 1 study
disease of the immune system
0 cell - 0 study
eosinophilic esophagitis
2617 cells - 2 studies
hypersensitivity pneumonitis
10390 cells - 2 studies
hypersensitivity syndrome
30925 cells - 2 studies
immune thrombocytopenia
2721 cells - 1 study
multiple sclerosis
312109 cells - 6 studies
psoriatic arthritis
41453 cells - 1 study
sarcoidosis
4891 cells - 1 study
scleroderma
180900 cells - 5 studies
sepsis
124288 cells - 4 studies
Sjogren's syndrome
32056 cells - 1 study
spontaneously healed atopic dermatitis
3698 cells - 2 studies
systemic lupus erythematosus
1030355 cells - 10 studies
systemic sclerosis-associated interstitial lung disease
107530 cells - 3 studies
T-bet deficiency
18337 cells - 1 study
Select all
631,271 cells - 20 studies
cirrhosis
24730 cells - 1 study
cystic fibrosis
95672 cells - 4 studies
fibrosis disease
33573 cells - 2 studies
idiopathic pulmonary fibrosis
468658 cells - 14 studies
nonspecific interstitial pneumonia
8638 cells - 1 study
Select all
1,209,070 cells - 52 studies
adult-onset asthma
73571 cells - 2 studies
atrophic gastritis
18276 cells - 1 study
chronic inflammation
14204 cells - 2 studies
chronic obstructive pulmonary disease
171682 cells - 3 studies
chronic periodontitis
42998 cells - 2 studies
chronic rhinitis
18036 cells - 1 study
chronic tonsillitis
37367 cells - 4 studies
Crohn's disease
251078 cells - 6 studies
Epstein-Barr virus (EBV)-associated hemophagocytic lymphohistiocytosis
9625 cells - 4 studies
hidradenitis suppurativa
50323 cells - 2 studies
interstitial lung disease
14078 cells - 3 studies
lymphadenitis
6841 cells - 1 study
multisystem inflammatory syndrome
73016 cells - 1 study
non-atrophic gastritis
0 cell - 0 study
osteoarthritis
7710 cells - 3 studies
paediatric-onset inflammatory bowel disease
12917 cells - 1 study
peripheral arthritis
6173 cells - 1 study
polymyositis
7189 cells - 1 study
rheumatoid arthritis
60580 cells - 4 studies
ulcerative colitis
333406 cells - 12 studies
Select all
5,556,555 cells - 66 studies
adenotonsillar disease
61 cells - 1 study
dengue infection
8989 cells - 2 studies
hemorrhagic fever with renal syndrome
0 cell - 0 study
hepatitis B virus infection
23649 cells - 1 study
hepatitis C virus infection
175 cells - 1 study
HIV infection
37602 cells - 4 studies
infectious or parasitic disease
0 cell - 0 study
influenza
33047 cells - 5 studies
influenza like illness
52324 cells - 1 study
leprosy
9389 cells - 1 study
measles virus
24551 cells - 1 study
pneumonia
10608 cells - 1 study
SARS-CoV
26789 cells - 2 studies
SARS-CoV-2
5328541 cells - 55 studies
tuberculosis
830 cells - 1 study
Select all
185,258 cells - 11 studies
diabetes
120512 cells - 2 studies
type 1 diabetes
35751 cells - 4 studies
type 2 diabetes
28995 cells - 7 studies
Select all
192,918 cells - 9 studies
COVID-19, ventilator-associated pneumonia
5014 cells - 1 study
lung adenocarcinoma, COPD
98493 cells - 2 studies
lung squamous cell carcinoma, COPD
3114 cells - 1 study
melanoma, ulcerative colitis
0 cell - 0 study
multiple diseases
86297 cells - 6 studies
Select all
73,495 cells - 5 studies
transplant rejection
73495 cells - 5 studies
Select all
6,275,306 cells - 139 studies
adenocarcinoma
3899 cells - 1 study
bladder transitional cell carcinoma
10762 cells - 1 study
bladder urothelial carcinoma
129422 cells - 7 studies
cholangiocarcinoma
1493 cells - 3 studies
chromophobe renal cell carcinoma
12051 cells - 4 studies
clear cell renal cell carcinoma
778546 cells - 20 studies
colon adenocarcinoma
466602 cells - 7 studies
colorectal adenocarcinoma
138588 cells - 4 studies
endometrial adenocarcinoma
40491 cells - 3 studies
esophageal adenocarcinoma
1704 cells - 1 study
esophageal carcinoma
32557 cells - 3 studies
esophageal squamous cell carcinoma
208659 cells - 2 studies
fallopian tube carcinoma
1037 cells - 2 studies
gastric adenocarcinoma
59029 cells - 6 studies
head and neck squamous cell carcinoma
255951 cells - 9 studies
hepatocellular carcinoma
259942 cells - 10 studies
intraductal papillary mucinous neoplasm
0 cell - 0 study
intrahepatic cholangiocarcinoma
64295 cells - 4 studies
large cell lung carcinoma
41130 cells - 4 studies
large cell neuroendocrine carcinoma
22205 cells - 1 study
lung adenocarcinoma
1955434 cells - 32 studies
lung pleomorphic carcinoma
10765 cells - 1 study
lung squamous cell carcinoma
386142 cells - 16 studies
melanoma
290698 cells - 21 studies
nasopharynx carcinoma
89410 cells - 3 studies
neoplasm of epithelial tissue
9768 cells - 2 studies
neuroendocrine carcinoma
37498 cells - 5 studies
ovarian carcinoma
83721 cells - 7 studies
pancreatic adenocarcinoma
2853 cells - 1 study
pancreatic adenosquamous carcinoma
0 cell - 0 study
pancreatic ductal adenocarcinoma
190898 cells - 6 studies
papillary renal cell carcinoma
15710 cells - 4 studies
prostate adenocarcinoma
20699 cells - 2 studies
prostate carcinoma
2170 cells - 1 study
rectum adenocarcinoma
26687 cells - 4 studies
renal cell carcinoma
31177 cells - 2 studies
renal cell carcinoma in von Hippel–Lindau
8382 cells - 2 studies
renal pelvis papillary urothelial carcinoma
14517 cells - 2 studies
skin basal cell carcinoma
74041 cells - 3 studies
skin squamous cell carcinoma
26016 cells - 1 study
squamous cell carcinoma
306559 cells - 5 studies
thyroid gland carcinoma
62270 cells - 3 studies
ureteral urothelial carcinoma
93 cells - 1 study
uterine corpus endometrial carcinoma
41463 cells - 3 studies
uveal melanoma
59972 cells - 1 study
Select all
1,180,514 cells - 46 studies
age-related macular degeneration
5322 cells - 2 studies
Alzheimer's disease
198880 cells - 8 studies
autism spectrum disorder
302429 cells - 15 studies
brain neoplasm
17370 cells - 2 studies
cataract
1395 cells - 1 study
epilepsy
158594 cells - 6 studies
glioblastoma multiforme
162027 cells - 4 studies
hemimegalencephaly
1560 cells - 1 study
hydrocephalus
7 cells - 1 study
idiopathic intracranial hypertension
0 cell - 0 study
major depressive disorder
43674 cells - 1 study
megalencephaly
0 cell - 0 study
mild cognitive impairment
9640 cells - 3 studies
nervous system disease
0 cell - 0 study
neuroinflammation
1411 cells - 1 study
Parkinson's disease
276329 cells - 8 studies
pediatric high-grade glioma
0 cell - 0 study
rasmussen's encephalitis
1876 cells - 1 study
Select all
924,121 cells - 25 studies
acute lymphocytic (or lymphoblastic) leukemia (ALL)
131038 cells - 3 studies
acute myeloid leukemia
68444 cells - 9 studies
chronic lymphocytic leukemia
113162 cells - 6 studies
chronic myeloid (or myelogenous) leukemia (CML)
210575 cells - 7 studies
megakaryoblastic leukemia
0 cell - 0 study
mixed phenotype acute leukemia
18149 cells - 2 studies
neoplasm of hematopoietic tissue
0 cell - 0 study
T-cell large granular lymphocytic leukemia
382753 cells - 1 study
Select all
1,995 cells - 1 study
azoospermia
1995 cells - 1 study
Select all
742,808 cells - 16 studies
acute kidney injury
156000 cells - 3 studies
Berger's disease
14764 cells - 2 studies
chronic kidney disease
253284 cells - 6 studies
diabetic kidney disease
86590 cells - 2 studies
disease of the genitourinary system
62051 cells - 1 study
hydrosalpinx
17798 cells - 1 study
hyperplasia of prostate
66181 cells - 2 studies
idiopathic membranous nephropathy
29892 cells - 1 study
kidney failure
0 cell - 0 study
nephrapostasis
80 cells - 1 study
pelvic organ prolapse
0 cell - 0 study
polycystic kidney disease
56168 cells - 1 study
Select all
299,081 cells - 16 studies
aneurysm
39651 cells - 1 study
atherosclerosis
20947 cells - 5 studies
atrial fibrillation
19304 cells - 2 studies
congenital heart disease
59099 cells - 3 studies
dilated cardiomyopathy
59860 cells - 4 studies
disease of the circulatory system
0 cell - 0 study
ischemic cardiomyopathy
60460 cells - 2 studies
long QT syndrome type 1
3514 cells - 1 study
pulmonary arterial hypertension
36246 cells - 1 study
Select all
34,804 cells - 3 studies
obstructive sleep apnea
34804 cells - 3 studies
Select all
645,223 cells - 19 studies
amyotrophic lateral sclerosis
173046 cells - 2 studies
esthesioneuroblastoma
11348 cells - 1 study
frontotemporal lobar degeneration
138395 cells - 1 study
glioma
241621 cells - 14 studies
medulloblastoma
8691 cells - 1 study
neoplasm of brain or central nervous system
0 cell - 0 study
neuroblastoma
53854 cells - 1 study
pituitary adenoma
18268 cells - 1 study
Select all
484,224 cells - 10 studies
B-cell lymphoma
9567 cells - 3 studies
diffuse large B cell lymphoma
177218 cells - 3 studies
follicular lymphoma
148624 cells - 3 studies
lymphoma
1807 cells - 2 studies
neoplasm of lymphoid tissues
0 cell - 0 study
non-Hodgkin lymphoma
30284 cells - 1 study
primary mediastinal B cell lymphoma
28196 cells - 1 study
transformed follicular lymphoma to diffuse large B cell lymphoma
88528 cells - 2 studies
Select all
406,642 cells - 15 studies
monoclonal gammopathy of undetermined significance
9112 cells - 2 studies
myeloma
372696 cells - 14 studies
neoplasm of plasma cell
0 cell - 0 study
smoldering multiple myeloma
24834 cells - 3 studies
Select all
242,265 cells - 12 studies
angiomyolipoma
1581 cells - 1 study
clear cell sarcoma of kidney
19731 cells - 2 studies
gastrointestinal stromal tumor
33975 cells - 1 study
hemangioma
7459 cells - 1 study
malignant rhabdoid tumor
21549 cells - 2 studies
mesoblastic nephroma
0 cell - 0 study
neoplasm of supportive and connective tissues
0 cell - 0 study
osteosarcoma
108957 cells - 1 study
sarcoma
49013 cells - 4 studies
Select all
46,850 cells - 5 studies
AL amyloidosis
4931 cells - 1 study
Crigler-Najjar syndrome
16946 cells - 1 study
nutritional or metabolic disease
0 cell - 0 study
obesity
24973 cells - 3 studies
Select all
234,535 cells - 10 studies
acne
4627 cells - 1 study
alopecia
1227 cells - 1 study
disease of the skin
0 cell - 0 study
granuloma annulare
2863 cells - 1 study
hypertrophic scar
17314 cells - 1 study
psoriasis
208504 cells - 9 studies
Select all
17,582 cells - 5 studies
aplastic anemia
7118 cells - 3 studies
disease of the blood or blood-forming organs
0 cell - 0 study
hereditary spherocytosis
9939 cells - 1 study
sickle cell disease
525 cells - 1 study
thrombocytopenia
0 cell - 0 study
Select all
28,091 cells - 3 studies
disease of the musculoskeletal system or connective tissue
8728 cells - 1 study
Dupuytren's disease
16571 cells - 1 study
frozen shoulder
2792 cells - 1 study
osteoporosis
0 cell - 0 study
Select all
59,202 cells - 6 studies
chronic pancreatitis
0 cell - 0 study
dental caries
9387 cells - 2 studies
disease of the digestive system
22899 cells - 1 study
functional gastric disease
11855 cells - 1 study
non-alcoholic steatohepatitis
182 cells - 1 study
odontogenic keratocyst
14879 cells - 1 study
Select all
19,396 cells - 1 study
presbyosmia
19396 cells - 1 study
Select all
0 cells - 0 study
disease of the visual system
0 cell - 0 study
keratoconus
0 cell - 0 study
limbal dysplasia
0 cell - 0 study
Select all
6,971 cells - 1 study
dementia due to Lewy body disease
6971 cells - 1 study
Select all
8,337 cells - 1 study
unexplained repeated pregnancy loss
8337 cells - 1 study
adjacent normal tissue
blood
inflammatory site
lesion
metastatic site
primary tumor
Select all
3,532,403 cells - 148 studies
adjacent normal tissue
3532403 cells - 148 studies
Select all
5,967,027 cells - 191 studies
high-grade tumor
1228161 cells - 50 studies
low-grade tumor
832202 cells - 47 studies
primary tumor
3906664 cells - 139 studies
Select all
822,049 cells - 42 studies
metastatic site
822049 cells - 42 studies
Select all
460,912 cells - 29 studies
inflammatory site
460912 cells - 29 studies
Select all
1,595,103 cells - 64 studies
lesion
1595103 cells - 64 studies
Select all
4,568,200 cells - 84 studies
blood
4568200 cells - 84 studies
B cell
blood cell
connective tissue cell
embryonic cell
endothelial cell
epithelial cell
extraembryonic cell
germ line cell
glial cell
innate lymphoid cell
kidney epithelial cell
muscle cell
myeloid leukocyte
neural cell
progenitor cell
retinal cell
secretory cell
somatic stem cell
T cell
Select all
1,529,387 cells - 160 studies
acinar cell
170644 cells - 21 studies
chondrocyte
103658 cells - 10 studies
cortical cell of adrenal gland
411113 cells - 7 studies
eccrine cell
422 cells - 1 study
endocrine cell
17908 cells - 13 studies
enteroendocrine cell
12243 cells - 20 studies
exocrine cell
5570 cells - 3 studies
gastrin secreting cell
1555 cells - 3 studies
glandular epithelial cell
7299 cells - 7 studies
goblet cell
225703 cells - 54 studies
granulosa cell
6626 cells - 2 studies
Leydig cell
10264 cells - 7 studies
mucus secreting cell
25100 cells - 11 studies
pancreatic A cell
35059 cells - 14 studies
pancreatic centro-acinar cell
681 cells - 1 study
pancreatic D cell
4388 cells - 12 studies
pancreatic ductal cell
78371 cells - 18 studies
pancreatic epsilon cell
271 cells - 7 studies
pancreatic PP cell
2459 cells - 12 studies
paneth cell
3980 cells - 4 studies
peptic cell
5195 cells - 3 studies
pulmonary neuroendocrine cell
68 cells - 1 study
secretory cell
341710 cells - 63 studies
serous secreting cell
7068 cells - 6 studies
type B pancreatic cell
52032 cells - 17 studies
Select all
2,977,003 cells - 353 studies
B cell
1510083 cells - 300 studies
early pro-B cell
1235 cells - 3 studies
follicular B cell
40276 cells - 10 studies
germinal center B cell
55130 cells - 18 studies
IgA plasma cell
114350 cells - 19 studies
IgG plasma cell
60492 cells - 19 studies
IgM plasma cell
8807 cells - 7 studies
immature B cell
3446 cells - 6 studies
mature B cell
36395 cells - 8 studies
memory B cell
185584 cells - 30 studies
naive B cell
316978 cells - 33 studies
plasma cell
498441 cells - 150 studies
plasmablast
119176 cells - 29 studies
precursor B cell
18281 cells - 17 studies
pro-B cell
8329 cells - 9 studies
regulatory B cell
0 cell - 0 study
Select all
12,481,886 cells - 422 studies
alpha-beta intraepithelial T cell
363 cells - 1 study
alpha-beta T cell
198 cells - 2 studies
CD4-positive, alpha-beta cytotoxic T cell
49381 cells - 14 studies
CD4-positive, alpha-beta T cell
2588312 cells - 195 studies
CD8-positive, alpha-beta cytotoxic T cell
121720 cells - 19 studies
CD8-positive, alpha-beta T cell
2312770 cells - 217 studies
central memory CD4-positive, alpha-beta T cell
729185 cells - 30 studies
central memory CD8-positive, alpha-beta T cell
128968 cells - 22 studies
conventional T cell
0 cell - 0 study
effector CD8-positive, alpha-beta T cell
460649 cells - 41 studies
effector memory CD4-positive, alpha-beta T cell
123527 cells - 25 studies
effector memory CD4-positive, alpha-beta T cell, terminally differentiated
26225 cells - 7 studies
effector memory CD8-positive, alpha-beta T cell
552972 cells - 28 studies
effector memory CD8-positive, alpha-beta T cell, terminally differentiated
79702 cells - 9 studies
effector T cell
11950 cells - 4 studies
exhausted T cell
120718 cells - 18 studies
gamma-delta T cell
185211 cells - 58 studies
intraepithelial lymphocyte
4838 cells - 3 studies
mature NK T cell
162149 cells - 59 studies
mature T cell
0 cell - 0 study
memory T cell
454614 cells - 43 studies
mucosal invariant T cell
158219 cells - 27 studies
naive T cell
132208 cells - 24 studies
naive thymus-derived CD4-positive, alpha-beta T cell
1156630 cells - 63 studies
naive thymus-derived CD8-positive, alpha-beta T cell
406816 cells - 52 studies
pro-T cell
49496 cells - 6 studies
regulatory T cell
491700 cells - 141 studies
T cell
1603312 cells - 251 studies
T follicular helper cell
184309 cells - 30 studies
T-helper 1 cell
73991 cells - 11 studies
T-helper 17 cell
68219 cells - 22 studies
T-helper 2 cell
43534 cells - 6 studies
Select all
5,190,720 cells - 360 studies
brush cell
7169 cells - 15 studies
cholangiocyte
9894 cells - 11 studies
chromaffin cell
93392 cells - 9 studies
ciliated cell
396760 cells - 79 studies
club cell
132485 cells - 40 studies
corneal epithelial cell
15461 cells - 9 studies
cortical thymic epithelial cell
9411 cells - 1 study
enterocyte
239667 cells - 26 studies
epithelial cell
1589576 cells - 188 studies
epithelial cell of conjunctiva
19486 cells - 12 studies
epithelial cell of lung
169281 cells - 17 studies
epithelial cell of thymus
1392 cells - 2 studies
foveolar cell of stomach
0 cell - 0 study
hepatocyte
129247 cells - 21 studies
interstitial cell of Cajal
0 cell - 0 study
intestinal epithelial cell
24545 cells - 1 study
ionocyte
7567 cells - 32 studies
keratinocyte
448024 cells - 29 studies
lens fiber cell
492 cells - 2 studies
luminal cell of prostate epithelium
58391 cells - 11 studies
luminal epithelial cell of mammary gland
491563 cells - 7 studies
medullary thymic epithelial cell
6614 cells - 2 studies
melanocyte
99043 cells - 55 studies
mesothelial cell
62893 cells - 27 studies
microfold cell
501 cells - 2 studies
multi-ciliated epithelial cell
83911 cells - 9 studies
myoepithelial cell
1382 cells - 6 studies
neuroendocrine cell
78345 cells - 34 studies
odontoblast
4741 cells - 3 studies
peritubular myoid cell
5554 cells - 4 studies
pneumocyte
235318 cells - 16 studies
prostate epithelium
501 cells - 1 study
Sertoli cell
22441 cells - 8 studies
simple columnar epithelial cell
3026 cells - 3 studies
squamous epithelial cell
56754 cells - 13 studies
stratified epithelial cell
58455 cells - 4 studies
suprabasal layer
86494 cells - 19 studies
thyroid follicular cell
7302 cells - 1 study
type I pneumocyte
96406 cells - 40 studies
type II pneumocyte
407879 cells - 55 studies
umbrella cell
8606 cells - 4 studies
urothelial cell
20751 cells - 5 studies
Select all
7,420,117 cells - 520 studies
alveolar macrophage
394141 cells - 15 studies
basophil
3339 cells - 7 studies
classical monocyte
1420339 cells - 75 studies
conventional dendritic cell
154227 cells - 79 studies
dendritic cell
333900 cells - 190 studies
eosinophil
2011 cells - 8 studies
follicular dendritic cell
363 cells - 3 studies
granulocyte
47592 cells - 14 studies
Hofbauer cell
1302 cells - 1 study
immature neutrophil
10768 cells - 6 studies
intermediate monocyte
23750 cells - 7 studies
Kupffer cell
36087 cells - 4 studies
Langerhans cell
32777 cells - 24 studies
macrophage
1835262 cells - 257 studies
mast cell
128145 cells - 163 studies
microglial cell
245762 cells - 59 studies
monoblast
4740 cells - 2 studies
monocyte
1295267 cells - 212 studies
myeloblast
944 cells - 3 studies
myeloid leukocyte
440259 cells - 103 studies
myeloid suppressor cell
9274 cells - 3 studies
neutrophil
670320 cells - 76 studies
non-classical monocyte
181043 cells - 32 studies
osteoclast
9182 cells - 3 studies
perivascular macrophage
0 cell - 0 study
plasmacytoid dendritic cell
60704 cells - 126 studies
pleural macrophage
2979 cells - 1 study
pre-conventional dendritic cell
4033 cells - 6 studies
tissue-resident macrophage
71607 cells - 12 studies
Select all
1,734,862 cells - 349 studies
capillary endothelial cell
164565 cells - 25 studies
corneal endothelial cell
3816 cells - 6 studies
endocardial cell
24846 cells - 6 studies
endothelial cell
723541 cells - 282 studies
endothelial cell in gonads
0 cell - 0 study
endothelial cell of artery
136424 cells - 29 studies
endothelial cell of high endothelial venule
37272 cells - 5 studies
endothelial cell of lymphatic vessel
111790 cells - 85 studies
endothelial cell of sinusoid
12835 cells - 6 studies
endothelial cell of vascular tree
357007 cells - 51 studies
endothelial stalk cell
2968 cells - 4 studies
glomerular endothelial cell
5953 cells - 7 studies
gut endothelial cell
0 cell - 0 study
retina endothelial cell
1809 cells - 5 studies
tip cell
5445 cells - 12 studies
umbilical endothelial cell
64701 cells - 2 studies
vein endothelial cell
81890 cells - 21 studies
Select all
2,378,128 cells - 302 studies
adventitial cell
1393 cells - 2 studies
chondroblast
4955 cells - 1 study
connective tissue cell
10609 cells - 4 studies
decidual cell
0 cell - 0 study
fat cell
52772 cells - 10 studies
fibroblast
1439416 cells - 214 studies
heart valve cell
477 cells - 1 study
hepatic stellate cell
9776 cells - 8 studies
keratocyte
26756 cells - 7 studies
kidney interstitial cell
120913 cells - 9 studies
leptomeningeal cell
7555 cells - 3 studies
mesangial cell
54297 cells - 16 studies
myofibroblast cell
91960 cells - 47 studies
osteoblast
51025 cells - 2 studies
pancreatic stellate cell
12546 cells - 8 studies
preadipocyte
16109 cells - 1 study
reticular cell
0 cell - 0 study
stromal cell
477569 cells - 58 studies
Select all
1,961,156 cells - 139 studies
astrocyte
693734 cells - 53 studies
ependymal cell
147010 cells - 8 studies
glial cell
93343 cells - 32 studies
macroglial cell
10696 cells - 3 studies
Mueller cell
92939 cells - 14 studies
oligodendrocyte
522343 cells - 47 studies
radial glial cell
390961 cells - 30 studies
Schwann cell
10130 cells - 18 studies
Select all
4,858,963 cells - 138 studies
Cajal-Retzius cell
6755 cells - 11 studies
corticothalamic-projecting glutamatergic cortical neuron
0 cell - 0 study
dopaminergic neuron
162248 cells - 6 studies
enteric neuron
2514 cells - 1 study
excitatory neuron
1755826 cells - 27 studies
extratelencephalic-projecting glutamatergic cortical neuron
0 cell - 0 study
GABAergic interneuron
72129 cells - 2 studies
GABAergic neuron
47693 cells - 19 studies
glutamatergic neuron
172115 cells - 5 studies
granule cell
330022 cells - 4 studies
inhibitory interneuron
134890 cells - 2 studies
inhibitory neuron
502337 cells - 27 studies
interneuron
85970 cells - 10 studies
intratelencephalic-projecting glutamatergic cortical neuron
0 cell - 0 study
motor neuron
209 cells - 2 studies
neural cell
875968 cells - 102 studies
neuroblast (sensu Vertebrata)
21920 cells - 6 studies
neuronal brush cell
57646 cells - 2 studies
oligodendrocyte precursor cell
88246 cells - 35 studies
Purkinje cell
312657 cells - 5 studies
pyramidal neuron
5454 cells - 1 study
sensory neuron
37808 cells - 1 study
serotonergic neuron
186556 cells - 2 studies
Select all
891,026 cells - 232 studies
blood cell
26353 cells - 7 studies
erythroblast
107909 cells - 17 studies
erythrocyte
164837 cells - 76 studies
leukocyte
261045 cells - 80 studies
lymphocyte
245855 cells - 68 studies
megakaryocyte
53556 cells - 54 studies
platelet
31471 cells - 23 studies
Select all
1,202,709 cells - 196 studies
cardiac muscle cell
496711 cells - 21 studies
cell of skeletal muscle
22525 cells - 6 studies
juxtaglomerular complex cell
637 cells - 2 studies
mural cell
5557 cells - 8 studies
muscle cell
126606 cells - 38 studies
pericyte cell
239846 cells - 89 studies
skeletal muscle myoblast
18999 cells - 2 studies
skeletal muscle satellite cell
22834 cells - 6 studies
smooth muscle cell
210023 cells - 85 studies
vascular associated smooth muscle cell
58971 cells - 22 studies
Select all
1,613,005 cells - 256 studies
group 1 innate lymphoid cell
73956 cells - 6 studies
group 2 innate lymphoid cell
5801 cells - 6 studies
group 3 innate lymphoid cell
11156 cells - 13 studies
innate lymphoid cell
33964 cells - 28 studies
lymphoid tissue–inducer cell
521 cells - 1 study
natural killer cell
1487607 cells - 247 studies
Select all
1,400,305 cells - 235 studies
basal cell
556543 cells - 100 studies
dental pulp stem cell
19481 cells - 2 studies
gonadal somatic cell
0 cell - 0 study
hematopoietic stem cell
184619 cells - 49 studies
hepatic stem cell
632 cells - 1 study
intestinal crypt stem cell
8102 cells - 6 studies
limbal stem cell
1921 cells - 5 studies
mesenchymal cell
528181 cells - 54 studies
neuroepithelial stem cell
15932 cells - 3 studies
neuronal stem cell
307 cells - 1 study
somatic stem cell
84587 cells - 37 studies
Select all
1,951,096 cells - 193 studies
airway progenitor cell
1767 cells - 1 study
alveolar progenitor
364 cells - 1 study
cardiac progenitor cell
52011 cells - 3 studies
cartilage progenitor cell
906 cells - 1 study
chondroprogenitor
2536 cells - 1 study
common dendritic progenitor
4829 cells - 5 studies
common lymphoid progenitor
158786 cells - 12 studies
common myeloid progenitor
32520 cells - 13 studies
corneal progenitor
3973 cells - 3 studies
deuterosomal precursor cell
287 cells - 2 studies
distal lung epithelial progenitor cell
1292 cells - 1 study
early lymphoid progenitor cell
4752 cells - 6 studies
endocrine progenitor
1735 cells - 1 study
endodermal progenitor cell
1284 cells - 1 study
endothelial progenitor cell
2920 cells - 8 studies
enterocyte progenitor
29556 cells - 4 studies
enteroendocrine precursor
252 cells - 2 studies
eosinophil-basophil-mast cell progenitor
3798 cells - 7 studies
epithelial progenitor cell
55014 cells - 20 studies
erythroid progenitor cell
96540 cells - 20 studies
exocrine progenitor
83 cells - 1 study
fibrochondrocyte progenitor cell
639 cells - 1 study
foveolar precursor
73 cells - 1 study
glial progenitor cell
286 cells - 1 study
goblet progenitor cell
0 cell - 0 study
granulocyte monocyte progenitor cell
18546 cells - 11 studies
hematopoietic multipotent progenitor cell
27389 cells - 13 studies
hematopoietic oligopotent progenitor cell
15401 cells - 1 study
hepatic progenitor cell
7459 cells - 1 study
hepatobiliary hybrid progenitor
143 cells - 1 study
hepatoblast
64549 cells - 3 studies
immature myeloid progenitor cell
2323 cells - 2 studies
innate lymphoid cell progenitor
685 cells - 2 studies
interstitial progenitor cell
1484 cells - 1 study
kidney interstitial progenitor cell
390 cells - 2 studies
Leydig precursor cell
0 cell - 0 study
limbal progentior cell
6489 cells - 3 studies
loop of Henle progenitor cell
1335 cells - 1 study
luminal progenitor
76674 cells - 3 studies
lung progenitor cell
145 cells - 1 study
lymphomyeloid-primed multipotent progenitor
1340 cells - 1 study
mast cell precursor
67 cells - 1 study
megakaryocyte progenitor cell
7931 cells - 7 studies
megakaryocyte-erythroid progenitor cell
22423 cells - 17 studies
monocyte precursor
4513 cells - 2 studies
monocyte–dendritic cell progenitor
2622 cells - 5 studies
multiciliated precursor cell
307 cells - 1 study
multipotent lung progenitor cell
2481 cells - 1 study
muscle progenitor cell
3353 cells - 2 studies
nephron progenitor cell
61659 cells - 16 studies
neural progenitor cell
737742 cells - 60 studies
neutrophil progenitor
5367 cells - 9 studies
neutrophilic myelocyte
1185 cells - 2 studies
notochordal cell
408 cells - 1 study
nucleus pulposus progenitor cell
2310 cells - 1 study
pancreatic progenitor
18137 cells - 4 studies
photoreceptor progenitor cell
520 cells - 1 study
plasmacytoid dendritic progenitor cell
336 cells - 1 study
podocyte precursor
2620 cells - 4 studies
primordial lung progenitor
796 cells - 1 study
progenitor cell
54 cells - 1 study
retinal progenitor cell
48894 cells - 7 studies
Schwann cell precursor
3660 cells - 3 studies
secretory precursor
1928 cells - 3 studies
stromal progenitor cell
4558 cells - 1 study
tendon progenitor cell
0 cell - 0 study
thymus-seeding progenitor cell
789 cells - 1 study
transit amplifying cell
328968 cells - 20 studies
tubular progenitor cell
4159 cells - 4 studies
yolk sac-derived myeloid-biased progenitor
2754 cells - 2 studies
Select all
524,705 cells - 29 studies
amacrine cell
47590 cells - 16 studies
cone retinal bipolar cell
0 cell - 0 study
glycinergic neuron
0 cell - 0 study
OFF-bipolar cell
19343 cells - 6 studies
ON-bipolar cell
21659 cells - 6 studies
photoreceptor cell
38821 cells - 6 studies
retina horizontal cell
20413 cells - 17 studies
retinal bipolar neuron
39724 cells - 13 studies
retinal cell
17992 cells - 7 studies
retinal cone cell
37787 cells - 14 studies
retinal ganglion cell
89218 cells - 21 studies
retinal pigment epithelial cell
15875 cells - 14 studies
retinal rod cell
150169 cells - 14 studies
rod bipolar cell
13057 cells - 5 studies
rod bipolar cell
13057 cells - 5 studies
Select all
544,181 cells - 28 studies
embryonic cell
1529 cells - 1 study
embryonic stem cell
9310 cells - 2 studies
endodermal cell
19931 cells - 7 studies
mesodermal cell
225484 cells - 11 studies
neural crest cell
12303 cells - 7 studies
pluripotent stem cell
275624 cells - 11 studies
Select all
991,039 cells - 60 studies
epithelial cell of distal tubule
41959 cells - 23 studies
epithelial cell of nephron
39212 cells - 20 studies
epithelial cell of proximal tubule
378420 cells - 49 studies
glomerular visceral epithelial cell
56313 cells - 42 studies
kidney collecting duct epithelial cell
12958 cells - 13 studies
kidney connecting tubule epithelial cell
19805 cells - 11 studies
kidney epithelial cell
130332 cells - 7 studies
kidney loop of Henle ascending limb epithelial cell
125218 cells - 14 studies
kidney loop of Henle descending limb epithelial cell
19984 cells - 9 studies
kidney loop of Henle epithelial cell
64524 cells - 22 studies
kidney pelvis urothelial cell
136 cells - 1 study
parietal epithelial cell
5895 cells - 9 studies
renal alpha-intercalated cell
5537 cells - 7 studies
renal beta-intercalated cell
2003 cells - 6 studies
renal intercalated cell
37664 cells - 17 studies
renal principal cell
51079 cells - 19 studies
Select all
53,227 cells - 5 studies
cytotrophoblast cell
6638 cells - 1 study
extraembryonic cell
0 cell - 0 study
extravillous trophoblast
6573 cells - 3 studies
placental villous trophoblast
9342 cells - 1 study
syncytiotrophoblast cell
0 cell - 0 study
trophectodermal cell
7526 cells - 1 study
trophoblast cell
20874 cells - 4 studies
trophoblast giant cell
2274 cells - 2 studies
Select all
55,924 cells - 18 studies
germ cell
2258 cells - 1 study
germ line cell
0 cell - 0 study
intermediate mesodermal cell
1755 cells - 1 study
oocyte
412 cells - 1 study
primordial germ cell
4005 cells - 4 studies
sperm
2121 cells - 3 studies
spermatid
13265 cells - 7 studies
spermatocyte
12250 cells - 7 studies
spermatogonial stem cell
1796 cells - 1 study
spermatogonium
18062 cells - 7 studies
central nervous system origin
epithelial origin
hematopoietic tissue origin
lymphoid tissue origin
other cancer types
plasma cell origin
undefined origin
Select all
1,393,926 cells - 75 studies
epithelial origin
1393926 cells - 75 studies
Select all
113,633 cells - 11 studies
connective tissue origin
113633 cells - 11 studies
Select all
159,428 cells - 11 studies
central nervous system origin
159428 cells - 11 studies
Select all
151,578 cells - 5 studies
plasma cell origin
151578 cells - 5 studies
Select all
114,440 cells - 4 studies
lymphoid tissue origin
114440 cells - 4 studies
Select all
289,413 cells - 7 studies
hematopoietic tissue origin
289413 cells - 7 studies
Select all
106,414 cells - 9 studies
undefined origin
106414 cells - 9 studies
androgen deprivation therapy
anti-inflammatory agent
anti-PD-1 and anti-CTLA-4 monoclonal antibody
antibiotics
antimetabolite
antiviral agent
CAR-T
chemotherapy
combined therapy
diabetes medication
disease-modifying antirheumatic drug
disease-modifying treatments
erythropoiesis–stimulating agent
histone deacetylase inhibitor
hormone
immunosuppressant medication
immunotherapy
monoclonal antibody
no treatment
proteasome inhibitor
protein kinase inhibitor
radiotherapy
steroid
T cell receptor engineering
vaccine
Select all
6,164,711 cells - 168 studies
no treatment
6164711 cells - 168 studies
Select all
591,449 cells - 29 studies
chemotherapy
591449 cells - 29 studies
Select all
39,946 cells - 8 studies
antiviral agent
39946 cells - 8 studies
Select all
64,567 cells - 9 studies
steroid
64567 cells - 9 studies
Select all
671,503 cells - 12 studies
protein kinase inhibitor
671503 cells - 12 studies
Select all
113,893 cells - 4 studies
CAR-T
113893 cells - 4 studies
Select all
677,354 cells - 37 studies
chemotherapy, anti-PD-1 monoclonal antibody
296884 cells - 2 studies
combined therapy
335352 cells - 23 studies
convalescent plasma, steroids, antibiotics
16934 cells - 3 studies
proteasome inhibitor, immunosuppressant medication
925 cells - 1 study
protein kinase inhibitor, anti-PD-1 monoclonal antibody
4024 cells - 1 study
protein kinase inhibitor, anti-PD-1, anti-CTLA4 and anti-KIR monoclonal antibody
427 cells - 4 studies
protein kinase inhibitor, antimetabolite
557 cells - 1 study
steroid, anti-inflammatory agent
1621 cells - 1 study
steroid, antibiotics
9749 cells - 4 studies
steroid, antiviral agent
1208 cells - 1 study
steroid, TNF inhibitor
904 cells - 1 study
TNF inhibitor, anti-inflammatory agent
600 cells - 1 study
TNF inhibitor, antimetabolite
8169 cells - 2 studies
Select all
84,391 cells - 5 studies
antibiotics
84391 cells - 5 studies
Select all
36,480 cells - 1 study
androgen deprivation therapy
36480 cells - 1 study
Select all
53,201 cells - 1 study
vaccine
53201 cells - 1 study
Select all
45,574 cells - 7 studies
anti-inflammatory agent
45574 cells - 7 studies
Select all
0 cells - 0 study
antimetabolite
0 cell - 0 study
Select all
9,773 cells - 3 studies
proteasome inhibitor
9773 cells - 3 studies
Select all
76,620 cells - 7 studies
immunosuppressant medication
76620 cells - 7 studies
Select all
14,584 cells - 3 studies
radiotherapy
14584 cells - 3 studies
Select all
0 cells - 0 study
anti-PD-1 and anti-CTLA-4 monoclonal antibody
0 cell - 0 study
durvalumab and tremelimumab
0 cell - 0 study
ipilimumab and nivolumab
0 cell - 0 study
RMP1-14 and 9D9
0 cell - 0 study
Select all
96 cells - 1 study
histone deacetylase inhibitor
96 cells - 1 study
Select all
144 cells - 1 study
T cell receptor engineering
144 cells - 1 study
Select all
9,156 cells - 2 studies
hormone
9156 cells - 2 studies
Select all
57 cells - 1 study
diabetes medication
57 cells - 1 study
Select all
57,008 cells - 1 study
disease-modifying antirheumatic drug
57008 cells - 1 study
Select all
0 cells - 0 study
erythropoiesis–stimulating agent
0 cell - 0 study
PROCRIT
0 cell - 0 study
Select all
4,393 cells - 3 studies
immunotherapy
4393 cells - 3 studies
Select all
1,151 cells - 1 study
disease-modifying treatments
1151 cells - 1 study
Select all
1,625,675 cells - 35 studies
anti alpha-4 integrin monoclonal antibody
37896 cells - 1 study
anti-CD20 monoclonal antibody
1638 cells - 1 study
anti-CD52 monoclonal antibody
382753 cells - 1 study
anti-CTLA4 monoclonal antibody
32107 cells - 9 studies
anti-EGFR monoclonal antibody
4488 cells - 1 study
anti-HER monoclonal antibody
1786 cells - 1 study
anti-IL-4Ralpha monoclonal antibody
13155 cells - 1 study
anti-PD-1 monoclonal antibody
938293 cells - 26 studies
monoclonal antibody
213559 cells - 12 studies
clonal expansion
nonresponse
objective response
Select all
1,119,076 cells - 43 studies
nonresponse
775230 cells - 30 studies
progressive disease
304675 cells - 14 studies
stable disease
39171 cells - 2 studies
Select all
132,528 cells - 3 studies
clonal expansion
132528 cells - 3 studies
Select all
1,101,681 cells - 40 studies
complete remission
286674 cells - 15 studies
objective response
684611 cells - 24 studies
residual disease
130396 cells - 10 studies
female
male
transfemale
Select all
17,939,826 cells - 443 studies
female
17939826 cells - 443 studies
Select all
20,001,737 cells - 471 studies
male
20001737 cells - 471 studies
Select all
5,207 cells - 1 study
transfemale
5207 cells - 1 study
adolescent
adult
child
first trimester fetal
infant
second trimester fetal
third trimester fetal
Select all
1,307,833 cells - 42 studies
first trimester fetal
1307833 cells - 42 studies
Select all
6,499,861 cells - 67 studies
second trimester fetal
6499861 cells - 67 studies
Select all
28,424,397 cells - 514 studies
adult
5309306 cells - 112 studies
middle-age adult
5839075 cells - 285 studies
old adult
12400290 cells - 338 studies
young adult
4875726 cells - 204 studies
Select all
1,055,160 cells - 40 studies
infant
1055160 cells - 40 studies
Select all
592,353 cells - 33 studies
adolescent
592353 cells - 33 studies
Select all
1,165,787 cells - 38 studies
child
1165787 cells - 38 studies
Select all
63,469 cells - 4 studies
third trimester fetal
63469 cells - 4 studies
10x
10X, single nuclei
automated microwell array-based platform
BD Rhapsody
C1 Fluidigm
CapID
CEL-Seq
CEL-Seq2
CITE-seq
ddSEQ
DroNc-seq
DropSeq
DropSeq, single nuclei
ECCITE-seq
GEXSCOPE scRNA
gmcSCRB-seq
ICELL8
inDrop
INs-seq
MARS-Seq
MARS-seq2.0
mCEL-Seq2
Microwell scRNA-seq
MIRACL-Seq
MutaSeq
Quartz-seq
scChaRM-seq
sci-Plex
sci-RNA-seq3
scTrio-seq2
Seq-Well
smart-seq
smart-seq2
SORT-seq
SPLiT-seq
STRT-seq
TARGET-seq
TruSeq
Select all
36,888,566 cells - 641 studies
10x
2036929 cells - 43 studies
Chromium 3'
4351188 cells - 101 studies
Chromium 3' v1
307937 cells - 21 studies
Chromium 3' v2
15008993 cells - 310 studies
Chromium 3' v3
6343722 cells - 150 studies
Chromium 5'
3463878 cells - 44 studies
Chromium 5' v1
2604947 cells - 21 studies
Chromium 5' v2
1958181 cells - 16 studies
Chromium 5' v3
812791 cells - 5 studies
Select all
34,927 cells - 12 studies
STRT-seq
34927 cells - 12 studies
Select all
684,616 cells - 27 studies
DropSeq
684616 cells - 27 studies
Select all
290,311 cells - 20 studies
inDrop
290311 cells - 20 studies
Select all
936,847 cells - 81 studies
smart-seq2
936847 cells - 81 studies
Select all
558,841 cells - 20 studies
Seq-Well
558841 cells - 20 studies
Select all
37,129 cells - 27 studies
C1 Fluidigm
37129 cells - 27 studies
Select all
214,331 cells - 6 studies
GEXSCOPE scRNA
214331 cells - 6 studies
Select all
66,545 cells - 5 studies
smart-seq
66545 cells - 5 studies
Select all
216,918 cells - 7 studies
MARS-Seq
216918 cells - 7 studies
Select all
26,420 cells - 12 studies
CEL-Seq2
26420 cells - 12 studies
Select all
694,302 cells - 19 studies
BD Rhapsody
694302 cells - 19 studies
Select all
117,342 cells - 4 studies
DropSeq, single nuclei
117342 cells - 4 studies
Select all
39,330 cells - 1 study
INs-seq
39330 cells - 1 study
Select all
2,866 cells - 2 studies
CEL-Seq
2866 cells - 2 studies
Select all
153,941 cells - 1 study
MIRACL-Seq
153941 cells - 1 study
Select all
1,013,906 cells - 7 studies
CITE-seq
1013906 cells - 7 studies
Select all
4,915,755 cells - 19 studies
sci-RNA-seq3
4915755 cells - 19 studies
Select all
100,175 cells - 3 studies
MARS-seq2.0
100175 cells - 3 studies
Select all
10,372 cells - 1 study
mCEL-Seq2
10372 cells - 1 study
Select all
18,353 cells - 3 studies
ddSEQ
18353 cells - 3 studies
Select all
1,684 cells - 1 study
gmcSCRB-seq
1684 cells - 1 study
Select all
21,449 cells - 5 studies
ICELL8
21449 cells - 5 studies
Select all
1,712 cells - 2 studies
Quartz-seq
1712 cells - 2 studies
Select all
14,963 cells - 1 study
DroNc-seq
14963 cells - 1 study
Select all
1,188 cells - 2 studies
scTrio-seq2
1188 cells - 2 studies
Select all
15,368 cells - 2 studies
SORT-seq
15368 cells - 2 studies
Select all
3,224,016 cells - 48 studies
10X, single nuclei
509721 cells - 6 studies
Chromium 3' v2, single nuclei
689012 cells - 14 studies
Chromium 3' v3, single nuclei
1763840 cells - 26 studies
Chromium 3', single nuclei
261443 cells - 5 studies
Chromium 5' v2, single nuclei
0 cell - 0 study
Chromium 5', single nuclei
0 cell - 0 study
Select all
23,793 cells - 1 study
automated microwell array-based platform
23793 cells - 1 study
Select all
899 cells - 1 study
scChaRM-seq
899 cells - 1 study
Select all
3,256 cells - 2 studies
TARGET-seq
3256 cells - 2 studies
Select all
117,091 cells - 2 studies
Microwell scRNA-seq
117091 cells - 2 studies
Select all
0 cells - 0 study
ECCITE-seq
0 cell - 0 study
Select all
5,228 cells - 1 study
MutaSeq
5228 cells - 1 study
Select all
136,957 cells - 5 studies
TruSeq
136957 cells - 5 studies
Select all
69,174 cells - 1 study
SPLiT-seq
69174 cells - 1 study
Select all
581,777 cells - 3 studies
sci-Plex
581777 cells - 3 studies
Select all
266,748 cells - 1 study
CapID
266748 cells - 1 study
BEDTools
bioconductor package
celescope
CellRanger
Cufflinks
dropEst
Dropseq-tools
featureCount
GSNAP
HTSeq
HTSeqGenie
Immcantation framework
kallisto
MetaCell
Rhapsody analysis pipeline
rpkmforgenes
RSEM
RUM
Salmon
scopetools
SEQC
SPLiT-seq pipeline
STAR
UMI tools
USeq package
zUMIs
Select all
38,180,955 cells - 695 studies
CellRanger
5431095 cells - 116 studies
CellRanger v1
680461 cells - 51 studies
CellRanger v2
12783694 cells - 240 studies
CellRanger v3
17487101 cells - 284 studies
CellRanger v4
1138908 cells - 10 studies
CellRanger v5
569036 cells - 12 studies
CellRanger v6
90660 cells - 6 studies
Select all
28,548 cells - 4 studies
GSNAP
28548 cells - 4 studies
Select all
306,446 cells - 41 studies
RSEM
306446 cells - 41 studies
Select all
174,567 cells - 9 studies
STAR
174567 cells - 9 studies
Select all
89,887 cells - 1 study
scopetools
89887 cells - 1 study
Select all
14,253 cells - 9 studies
rpkmforgenes
14253 cells - 9 studies
Select all
561,762 cells - 28 studies
featureCount
561762 cells - 28 studies
Select all
361,734 cells - 7 studies
dropEst
361734 cells - 7 studies
Select all
635 cells - 1 study
RUM
635 cells - 1 study
Select all
5,055,494 cells - 54 studies
HTSeq
5055494 cells - 54 studies
Select all
1,652,027 cells - 39 studies
Dropseq-tools
1652027 cells - 39 studies
Select all
215,689 cells - 5 studies
MetaCell
215689 cells - 5 studies
Select all
1,126,292 cells - 6 studies
kallisto
1126292 cells - 6 studies
Select all
276,139 cells - 9 studies
SEQC
276139 cells - 9 studies
Select all
693,075 cells - 10 studies
zUMIs
693075 cells - 10 studies
Select all
4,147 cells - 6 studies
Cufflinks
4147 cells - 6 studies
Select all
100,597 cells - 3 studies
HTSeqGenie
100597 cells - 3 studies
Select all
143,127 cells - 8 studies
Rhapsody analysis pipeline
143127 cells - 8 studies
Select all
105,462 cells - 5 studies
UMI tools
105462 cells - 5 studies
Select all
123,997 cells - 5 studies
Salmon
123997 cells - 5 studies
Select all
4,064 cells - 1 study
Immcantation framework
4064 cells - 1 study
Select all
39,285 cells - 1 study
celescope
39285 cells - 1 study
Select all
69,174 cells - 1 study
SPLiT-seq pipeline
69174 cells - 1 study
Select all
385 cells - 1 study
bioconductor package
385 cells - 1 study
Select all
0 cells - 0 study
USeq package
0 cell - 0 study
Select all
581,777 cells - 3 studies
BEDTools
581777 cells - 3 studies
aspirate
biopsy
bronchial lavage
bronchoalveolar lavage
bronchoscopic microsampling
brushing
core needle biopsy
endoscopic biopsy
forceps biopsy
leukapheresis
lumbar puncture
nasopharyngeal swab
needle biopsy
paracentesis
punch biopsy
sputum induction
suction blister
surgical resection
thoracentesis
venipuncture
Select all
386,075 cells - 8 studies
nasopharyngeal swab
386075 cells - 8 studies
Select all
9,762 cells - 1 study
bronchial lavage
9762 cells - 1 study
Select all
512,623 cells - 10 studies
brushing
512623 cells - 10 studies
Select all
491,037 cells - 29 studies
core needle biopsy
491037 cells - 29 studies
Select all
25,453,733 cells - 524 studies
surgical resection
25453733 cells - 524 studies
Select all
12,886,908 cells - 180 studies
venipuncture
12886908 cells - 180 studies
Select all
43,830 cells - 6 studies
paracentesis
43830 cells - 6 studies
Select all
574,274 cells - 21 studies
endoscopic biopsy
574274 cells - 21 studies
Select all
965,471 cells - 34 studies
punch biopsy
965471 cells - 34 studies
Select all
662,032 cells - 25 studies